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Explain how inhibitors of topoisomerase would inhibit the growth of tumors.Would these drugs be expected to inhibit the growth of normal cells as well?

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Dividing cells must replicate their DNA;...

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Plectonemic supercoils in a negatively supercoiled DNA molecule:


A) are always left-handed.
B) are always right-handed.
C) are balanced by solenoidal supercoils
D) can be either right- or left-handed.
E) never occur.

F) C) and D)
G) A) and D)

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Nucleosomes:


A) are important features of chromosome organization in eukaryotes and bacteria.
B) are composed of proteins rich in acidic amino acids,such as Asp and Glu.
C) are composed of protein and RNA.
D) bind DNA and alter its supercoiling.
E) occur in chromatin at irregular intervals along the DNA molecule.

F) D) and E)
G) B) and E)

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The overall compaction of a eukaryotic chromosome is greater than ____________ -fold.The first level is nucleosome formation,which compacts about _________ -fold.Next is the 30 nm fiber,which compacts about ________ -fold overall.Higher order folding involves association of the DNA with a nuclear ______________________,which contains large amounts of ________________ and ___________________.

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10,000
7
100
scaffol...

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The SMC proteins (for structural maintenance of chromosomes) include cohesins and condensins,and are known to have all of the following properties except:


A) a complete ATP binding site.
B) a hinge region.
C) topoisomerase activity to produce positive supercoils.
D) the ability to condense DNA.
E) two coiled-coil domains.

F) D) and E)
G) C) and E)

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Topoisomerases can:


A) change the linking number (Lk) of a DNA molecule.
B) change the number of base pairs in a DNA molecule.
C) change the number of nucleotides in a DNA molecule.
D) convert D isomers of nucleotides to L isomers.
E) interconvert DNA and RNA.

F) D) and E)
G) B) and C)

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Define,in the context of DNA structure,"topoisomers."

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Topoisomers are different form...

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Which of the following does not contribute to the octameric histone core?


A) H1
B) H2A
C) H2B
D) H3
E) H4

F) B) and D)
G) A) and E)

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Which of these statements about nucleic acids is false?


A) Mitochondria and chloroplasts contain DNA.
B) Plasmids are genes that encode plasma proteins in mammals.
C) The chromosome of E.coli is a closed-circular,double-helical DNA.
D) The DNA of viruses is usually much longer than the viral particle itself.
E) The genome of many plant viruses is RNA.

F) C) and E)
G) C) and D)

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Explain the difference between plectonemic and solenoidal supercoiling of DNA;use diagrams to help in your explanation.

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In plectonemic supercoiling,the double h...

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It is correct to say that DNA supercoiling cannot:


A) be induced by strand separation.
B) be induced by underwinding of the double helix.
C) form if there is Z-DNA structure present.
D) occur if a closed circular double-stranded DNA molecule has a nick.
E) result in compaction of the DNA structure.

F) C) and D)
G) B) and E)

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A condensed eukaryotic chromosome is known to be associated with all of the following proteins,except for:


A) core histones H2A,H2B,H3,and H4.
B) histone H1.
C) SMC proteins.
D) topoisomerase I.
E) topoisomerase II.

F) A) and D)
G) A) and C)

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Briefly describe the changes in eukaryotic chromosome structure during the cell cycle.

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Starting with prophase,the DNA undergoes...

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Histones are _______ that are usually associated with _________.


A) acidic proteins;DNA
B) acidic proteins;RNA
C) basic proteins;DNA
D) basic proteins;RNA
E) coenzymes derived from histidine;enzymes

F) C) and D)
G) D) and E)

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Approximately what fraction of the human genome is tranaposable elements?


A) 1) 5%
B) 5%
C) 10%
D) 45%
E) 80%

F) B) and D)
G) A) and B)

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For a closed-circular DNA molecule of 10,000 base pairs in the fully relaxed form,the linking number (Lk) is about:


A) 10,000.
B) 950.
C) 100.
D) 9) 5.
E) 2)

F) A) and D)
G) C) and D)

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Bacterial plasmids:


A) are always covalently joined to the bacterial chromosome.
B) are composed of RNA.
C) are never circular.
D) cannot replicate when cells divide.
E) often encode proteins not normally essential to the bacterium's survival.

F) B) and E)
G) A) and B)

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The most precise modern definition of a gene is a segment of genetic material that:


A) codes for one polypeptide.
B) codes for one polypeptide or RNA product.
C) determines one phenotype.
D) determines one trait.
E) that codes for one protein.

F) A) and B)
G) A) and C)

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Functional DNA is not found in:


A) bacterial nucleoids.
B) chloroplasts.
C) lysosomes.
D) mitochondria.
E) nuclei.

F) A) and D)
G) D) and E)

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Topoisomerases:


A) can change the linking number in increments of 1 or 2.
B) can act on single-stranded DNA circles.
C) change the degree of supercoiling of a DNA molecule but not its linking number of DNA.
D) occur in bacteria,but not in eukaryotes.
E) always require energy from ATP.

F) B) and D)
G) A) and B)

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