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You are having lunch with an elderly friend when suddenly he begins to experience chest pain and tightness.He reaches into his pocket,gets out one of his nitroglycerin tablets and quickly takes it.After the episode passes,your friend asks you how the nitroglycerin helps his angina.You explain that nitroglycerin gets converted by cells to nitric oxide (NO) causing the smooth muscle cells of the blood vessel to relax and increase blood flow to the heart.He pushes you for a more detailed explanation,so you explain further that:


A) NO activates guanylyl cyclase,which catalyzes the synthesis of cGMP,which acts as an intracellular messenger in a pathway leading to smooth muscle relaxation.
B) NO activates a protein kinase which catalyzes the synthesis of cGMP,which acts as an intracellular messenger in a pathway leading to smooth muscle relaxation.
C) NO inhibits guanylyl cyclase,which allows the build up of cGMP,which acts as an intracellular messenger in a pathway leading to smooth muscle relaxation.
D) NO activates cGMP,which catalyzes the synthesis of guanylyl cyclase,which acts as an intracellular messenger in a pathway leading to smooth muscle relaxation.

E) None of the above
F) B) and C)

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You have identified a molecule,molecule X,that can bind to the ATP binding site of a specific protein kinase,and prevent ATP binding.You are conducting a kinase assay using this protein kinase and a known substrate of this kinase,and have set up the reaction using the proper conditions and cofactors to allow for optimal protein kinase activity.If you add molecule X to the reaction,what do you predict will be the outcome?


A) The substrate will be phosphorylated normally in the presence of molecule X.
B) Less phosphorylation of the substrate will be seen in the presence of molecule X.
C) More phosphorylation of the substrate will be seen in the presence of molecule X.

D) B) and C)
E) A) and B)

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The function of adenylyl cyclase is to:


A) catalyze the conversion of ATP to cAMP.
B) cleave PIP2 into DAG and IP3.
C) directly activate protein kinase A (PKA) .
D) stimulate the release of calcium from the endoplasmic reticulum.

E) C) and D)
F) B) and C)

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In synaptic signaling,neurotransmitters are released into a space that is referred to as a:


A) chemical synapse.
B) neuron junction.
C) paracrine space.
D) gap junction.
E) plasmodesmata.

F) A) and D)
G) A) and E)

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You are performing an experiment to assay phosphorylation of a substrate by a protein kinase.Based on the data in the table below,what do these experimental results suggest? You are performing an experiment to assay phosphorylation of a substrate by a protein kinase.Based on the data in the table below,what do these experimental results suggest?   A) GTP is not required for phosphorylation. B) The substrate can undergo autophosphorylation. C) The substrate is not required for phosphorylation. D) The protein kinase is required for phosphorylation.


A) GTP is not required for phosphorylation.
B) The substrate can undergo autophosphorylation.
C) The substrate is not required for phosphorylation.
D) The protein kinase is required for phosphorylation.

E) A) and B)
F) All of the above

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What enzyme phosphorylates MAP kinase kinase?


A) MAP kinase
B) MAP kinase kinase
C) MAP kinase kinase kinase
D) MAP phosphatase

E) A) and D)
F) B) and C)

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The protein Sonic Hedgehog (SHH) plays a role in specifying the identity of digits (such as fingers and toes) in mammals.Several digits arise directly from cells that both express and respond to secreted SHH.What type of signaling would this be considered?


A) Direct contact
B) Paracrine
C) Endocrine
D) Synaptic
E) Autocrine

F) B) and C)
G) A) and E)

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You have identified a novel cytoplasmic protein.Through sequence analysis you are able to identify the presence of a number of serine/threonine phosphorylation motifs.Based on these data,you hypothesize that this protein may be a substrate for what kind of enzyme?


A) A protein kinase
B) A receptor tyrosine kinase
C) A G protein-coupled receptor
D) A tyrosine phosphatase
E) A phospholipase

F) A) and E)
G) A) and D)

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One cell sends second messengers to another cell through gap junctions.What type of signaling would this be considered?


A) Direct contact
B) Paracrine
C) Endocrine
D) Synaptic
E) Autocrine

F) C) and E)
G) A) and E)

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A small number of cell surface receptors can ultimately generate a large intracellular response due to activation of kinase cascades.This is referred to as:


A) signal amplification.
B) signal transduction.
C) signal dampening.
D) signal activation.

E) A) and C)
F) C) and D)

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Many receptor tyrosine kinase pathways have MAPK as a downstream signaling component.MAPK can phosphorylate target proteins.What type of signaling molecule is MAPK?


A) Scaffold
B) Adapter protein
C) Second messenger
D) Enzyme

E) None of the above
F) B) and C)

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When bound to ligand,this type of receptor changes conformation to allow ions to move down their concentration gradient across the membrane:


A) Channel-linked receptor
B) Enzymatic receptor
C) G protein-coupled receptor
D) Steroid hormone receptor

E) B) and D)
F) A) and D)

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Growth of new blood vessels is stimulated by vascular endothelial growth factor (VEGF) .This ligand binds to the VEGF receptor,which leads to the dimerization and autophosphorylation of this receptor on cytoplasmic tyrosines.What type of receptor is the VEGF receptor?


A) Channel-linked receptor
B) Enzymatic receptor
C) G protein-coupled receptor
D) Steroid hormone receptor

E) B) and C)
F) A) and D)

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You are planning to perform some protein-protein interaction studies to identify a receptor for a steroid hormone you have been working on.You start by fractionating the cell.What cell fraction would you want to work with to identify the steroid hormone receptor of interest?


A) The plasma membrane fraction
B) The extracellular fraction
C) The cytoplasmic fraction
D) The mitochondrial fraction
E) The ribosomal fraction

F) C) and D)
G) All of the above

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What second messenger is directly involved in activating protein kinase C (PKC) ?


A) DAG
B) cAMP
C) cGMP
D) Phospholipase C
E) G protein

F) C) and E)
G) A) and D)

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The protein SOS is a guanine nucleotide exchange factor for Ras.SOS helps facilitate the exchange of GDP for GTP.What would be the effect of a mutation that inhibits the interaction between SOS and Ras?


A) GTP would remain bound to Ras,thereby keeping Ras constitutively active.
B) GDP would remain bound to Ras,thereby preventing Ras activation.
C) Ras would be more likely to hydrolyze GTP to GDP.
D) There would be no effect.

E) A) and C)
F) C) and D)

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Some enzymatic receptors and most G protein-coupled receptors transmit the signal into the cytoplasm by utilizing other substances within the cytoplasm that are referred to as:


A) genes.
B) intracellular receptors.
C) second messengers.
D) first messengers.

E) A) and B)
F) A) and C)

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What is the difference between Ras and the G proteins bound to G protein coupled receptors (GPCRs) ?


A) Ras is an enzyme and the G proteins bound to GPCRs are not enzymes.
B) Ras is a second messenger and the G proteins bound to GPCRs are not second messengers.
C) Ras is a small G protein and the G proteins bound to GPCRs are not small G proteins.
D) Ras can activate different effector molecules and the G proteins bound to GPCRs cannot activate different effector molecules.

E) B) and C)
F) A) and D)

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Why are phosphorylation and dephosphorylation reactions commonly used to regulate signal transduction pathways?


A) Phosphate groups are efficient second messengers
B) Protein kinases and phosphatases are abundant in most cells
C) The hydrolysis of bound GTP generates GDP,which can change the activity of proteins bound to GDP
D) The addition or removal of a phosphate group can expose or hide potential binding sites in proteins or change protein activity

E) A) and D)
F) A) and C)

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Tamoxifen is a drug that is used to treat breast cancer.It inhibits the activities of the estrogen receptor in breast epithelial cells,which are the cells that are relevant to breast cancer.One of the concerns that scientists had during the development of Tamoxifen as a therapy for breast cancer was that other cell types require estrogen signaling for their function.For example,it is known that cells in bone tissue require estrogen signaling.As a result,there was a concern that use of Tamoxifen would lead to bone loss in patients.In reality,however,researchers were surprised to find that Tamoxifen actually led to an increase in bone density in breast cancer patients.At the same time,Tamoxifen did inhibit the activity of the estrogen receptor in breast epithelial cells in these patients.What is the best explanation for this finding?


A) Tamoxifen binds different parts of the estrogen receptor in different tissues.
B) The estrogen receptor is bound to different coactivators in different tissues.
C) Tamoxifen can only enter certain cell types.
D) Bone cells make use of a different type of estrogen receptor that does not bind to Tamoxifen.

E) A) and B)
F) A) and C)

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